Model info
Transcription factorSp4
ModelSP4_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length24
Quality
D
ConsensusRSRdSSRKGGSSGGSGSGSvGbSv
wAUC
Best AUC
Benchmark datasets
Aligned words23
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI107595
EntrezGene
UniProt IDSP4_MOUSE
UniProt ACQ62445
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7941
0.0005 4.7601
0.0001 6.7881
PCM
ACGT
014.9323.80113.4760.785
021.0056.91114.0731.005
035.9060.012.9424.147
043.773.01611.0585.152
052.0114.1996.7850.0
061.00516.2094.7751.005
0712.3142.897.7910.0
081.0054.02113.8224.147
090.02.0117.2153.77
100.02.0117.9693.016
111.0053.89517.0891.005
122.017.16213.8220.0
130.01.13121.8640.0
141.0052.0118.8481.131
151.0055.02615.9581.005
160.01.00521.990.0
171.75911.05810.1780.0
180.01.00519.8532.136
192.1366.03114.8270.0
203.8957.03711.0581.005
210.08.29314.7020.0
223.01610.6816.1573.141
230.013.9488.0421.005
245.4355.05811.2151.288
PWM
ACGT
01-0.134-0.3540.781-1.426
02-1.2950.1640.822-1.295
030.024-2.120.743-0.281
04-0.361-0.5420.595-0.096
05-0.8490.830.147-2.12
06-1.2950.956-0.161-1.295
070.696-0.5760.272-2.12
08-1.295-0.3070.805-0.281
09-2.12-0.8491.013-0.361
10-2.12-0.8491.055-0.542
11-1.295-0.3341.006-1.295
12-0.8490.1960.805-2.12
13-2.12-1.2271.243-2.12
14-1.295-0.8491.1-1.227
15-1.295-0.1170.941-1.295
16-2.12-1.2951.249-2.12
17-0.9430.5950.518-2.12
18-2.12-1.2951.15-0.805
19-0.8050.0420.871-2.12
20-0.3340.180.595-1.295
21-2.120.3290.863-2.12
22-0.5420.5620.061-0.509
23-2.120.8130.301-1.295
24-0.049-0.1120.608-1.148