Model info
Transcription factorSP4
ModelSP4_HUMAN.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length22
Quality
D
ConsensusRKGGGCGGRGSSdSSvbSvvSv
wAUC
0.7801088292884774
Best AUC
0.7801088292884774
Benchmark datasets1
Aligned words524
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11209
EntrezGene6671
UniProt IDSP4_HUMAN
UniProt ACQ02446
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.9391
0.0005 4.0191
0.0001 6.2981
PCM
ACGT
0189.12157.639336.40312.092
0252.42724.875364.89753.056
0360.57841.283389.0344.36
0412.24125.104448.3099.601
0512.4397.549471.9653.302
0632.342435.5377.89419.483
073.85318.218461.05112.132
0820.10931.066403.32740.752
0963.90723.235379.48128.631
1033.83632.552414.66514.202
1143.315363.19765.91922.824
1239.353325.75582.6647.486
13100.00671.026205.31118.913
1425.19987.374355.38127.302
1560.49111.972302.29520.499
1674.739123.953259.76236.801
1740.283169.306243.31342.353
1840.011154.75263.52936.965
1981.65104.489275.61533.501
2084.742105.946256.81847.749
2145.4199.577320.86629.403
2257.739161.969235.6139.936
PWM
ACGT
01-0.324-0.750.992-2.218
02-0.843-1.5571.073-0.831
03-0.702-1.0741.136-3.054
04-2.207-1.5481.278-2.42
05-2.193-2.6231.329-3.252
06-1.3081.249-2.586-1.785
07-3.144-1.8471.306-2.215
08-1.756-1.3461.172-1.086
09-0.65-1.6211.112-1.424
10-1.265-1.3021.2-2.074
11-1.0281.068-0.62-1.638
12-1.120.96-0.398-0.939
13-0.211-0.5470.501-0.04
14-1.545-0.3431.046-1.469
15-0.703-0.0990.885-1.738
16-0.4970.0010.734-1.184
17-1.0980.310.669-1.049
18-1.1040.2210.749-1.18
19-0.41-0.1670.793-1.274
20-0.373-0.1540.723-0.933
21-0.982-0.2150.945-1.399
22-0.7490.2660.638-1.106