Model info
Transcription factorSP3
ModelSP3_HUMAN.H10MO.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length20
Quality
B
ConsensusvvvvvKGGGMGGRSvbdvvv
wAUC
Best AUC
Benchmark datasets
Aligned words415
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11208
EntrezGene6670
UniProt IDSP3_HUMAN
UniProt ACQ02447
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.1981
0.0005 5.1511
0.0001 7.1021
PCM
ACGT
0186.18193.995173.76861.174
0272.89690.651197.11854.453
0394.65291.338182.23946.888
04114.65791.026161.60847.826
0571.33382.898230.25330.634
0650.13931.134264.9568.894
0757.5161.0354.851.75
081.04.251405.744.126
094.0018.127401.1131.876
1097.34260.51121.00636.26
1118.44314.254369.54212.879
123.0016.127361.85244.137
1378.64714.504298.58423.382
1439.51155.266304.96115.379
1547.388229.9499.27838.511
1646.513152.418130.97585.212
17106.90555.203186.7466.269
1883.27469.52214.12348.201
1968.019110.031189.11647.951
2075.584100.403186.7452.39
PWM
ACGT
01-0.183-0.0980.51-0.519
02-0.347-0.1330.635-0.632
03-0.091-0.1260.557-0.777
040.098-0.1290.438-0.758
05-0.368-0.2210.789-1.187
06-0.712-1.1710.929-0.402
07-0.579-3.7371.219-3.476
08-3.737-2.9061.353-2.928
09-2.95-2.3911.341-3.438
10-0.0630.912-1.543-1.025
11-1.663-1.8991.26-1.99
12-3.151-2.6241.239-0.836
13-0.273-1.8831.047-1.442
14-0.943-0.6181.068-1.83
15-0.7670.788-0.044-0.967
16-0.7850.380.23-0.194
170.029-0.6190.581-0.44
18-0.217-0.3940.717-0.751
19-0.4150.0580.594-0.756
20-0.312-0.0330.581-0.67