Model info
Transcription factorSp2
ModelSP2_MOUSE.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length17
Quality
C
ConsensusddRKRRGGSGKRRbbRv
wAUC
Best AUC
Benchmark datasets
Aligned words31
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI1926162
EntrezGene78912
UniProt IDSP2_MOUSE
UniProt ACQ9D2H6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.8781
0.0005 5.6121
0.0001 7.1111
PCM
ACGT
017.1795.02212.6276.157
0212.7123.6329.6474.994
036.810.90817.2526.015
041.8160.90815.32212.939
055.9023.85918.2732.951
066.9233.06420.9970.0
070.00.030.9850.0
080.04.08626.8990.0
092.83719.1818.9660.0
102.0432.04326.8990.0
110.03.85922.3594.767
1213.7330.015.3221.929
1311.2365.10714.6410.0
144.8813.626.3566.129
152.9516.3566.46915.209
1619.8621.8167.2642.043
1716.3444.7675.7884.086
PWM
ACGT
01-0.068-0.3810.449-0.204
020.456-0.650.2-0.385
03-0.115-1.5830.744-0.225
04-1.169-1.5830.6320.472
05-0.241-0.6010.799-0.815
06-0.101-0.7850.932-2.305
07-2.305-2.3051.309-2.305
08-2.305-0.5541.171-2.305
09-0.8450.8450.133-2.305
10-1.087-1.0871.171-2.305
11-2.305-0.6010.993-0.425
120.528-2.3050.632-1.127
130.34-0.3660.589-2.305
14-0.4050.52-0.176-0.208
15-0.815-0.176-0.1610.624
160.879-1.169-0.058-1.087
170.693-0.425-0.258-0.554