Model info
Transcription factorSP2
ModelSP2_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length22
Quality
C
ConsensusSvvvvRRRGGCGGRRSbnvvSv
wAUC
0.742523020189073
Best AUC
0.7673681305651433
Benchmark datasets4
Aligned words499
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11207
EntrezGene6668
UniProt IDSP2_HUMAN
UniProt ACQ02086
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.5951
0.0005 4.6171
0.0001 6.7511
PCM
ACGT
0164.149124.873284.08726.083
0289.849122.861261.04925.431
0375.251140.861251.91831.161
0477.127159.086209.94653.033
05143.753110.87191.86552.703
0687.4649.97327.89133.871
0769.88827.829352.48648.988
08147.77327.391314.7339.293
0918.8662.117458.55919.649
106.07510.404477.6895.023
1121.675444.1516.39126.974
1216.1538.173449.42125.444
136.26410.048466.53916.339
1449.57543.373392.38913.855
15110.21588.644290.3829.95
1651.828301.859109.14836.356
1724.988253.651116.53104.022
18100.49194.942195.979107.779
1964.726118.297262.8453.328
2090.861128.761232.64246.926
2175.13492.595294.17637.286
2261.262162.919247.0627.95
PWM
ACGT
01-0.6540.0010.816-1.52
02-0.324-0.0150.732-1.544
03-0.4980.120.696-1.351
04-0.4740.240.515-0.839
050.14-0.1170.426-0.845
06-0.35-0.8970.958-1.272
07-0.57-1.4591.03-0.916
080.167-1.4740.918-2.455
09-1.823-3.5391.292-1.785
10-2.807-2.3581.333-2.956
11-1.6941.261-2.767-1.488
12-1.965-2.5641.272-1.543
13-2.783-2.3881.31-1.955
14-0.905-1.0341.137-2.104
15-0.123-0.3370.837-2.396
16-0.8620.876-0.132-1.204
17-1.560.703-0.068-0.18
18-0.214-0.270.447-0.145
19-0.645-0.0530.738-0.834
20-0.3130.0310.617-0.958
21-0.499-0.2940.85-1.18
22-0.6990.2640.677-1.455