Model info
Transcription factorSp1
ModelSP1_MOUSE.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length11
Quality
S
ConsensusRKGGGMGGRRv
wAUC
Best AUC
Benchmark datasets
Aligned words3614
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI98372
EntrezGene20683
UniProt IDSP1_MOUSE
UniProt ACO89090
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.0291
0.0005 5.0771
0.0001 7.1761
PCM
ACGT
01682.644443.1462075.655287.211
02299.888103.7432613.893471.132
03591.48942.6322845.1659.369
047.07145.2913432.8853.409
0591.30919.1543373.6574.536
06809.2082246.94261.308371.198
07120.56542.4353242.15683.5
0813.72535.8583332.407106.666
09558.11990.0082694.855145.674
10264.009254.7182796.881173.049
11519.461874.935654.541439.72
PWM
ACGT
01-0.244-0.6750.866-1.106
02-1.063-2.1121.096-0.614
03-0.387-2.9741.181-4.339
04-4.564-2.9161.368-5.078
05-2.237-3.721.351-4.89
06-0.0750.945-2.625-0.851
07-1.964-2.9781.311-2.324
08-4.016-3.1381.339-2.085
09-0.445-2.2511.127-1.778
10-1.19-1.2251.164-1.608
11-0.5170.764-0.286-0.683