Model info
Transcription factorEgr4
ModelEGR4_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length11
Quality
D
ConsensusGGSGGYAGGGM
wAUC
Best AUC
Benchmark datasets
Aligned words6
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilyEGR factors{2.3.1.3}
MGI99252
EntrezGene13656
UniProt IDEGR4_MOUSE
UniProt ACQ9WUF2
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.8687
0.0005 5.5295
0.0001 7.1116
PCM
ACGT
010.1260.1265.6230.126
020.00.06.00.0
030.03.0822.0120.906
040.00.06.00.0
050.00.06.00.0
060.03.5850.5031.912
073.4850.02.5150.0
080.00.05.0940.906
090.00.5035.4970.0
100.00.06.00.0
111.613.1830.6040.604
PWM
ACGT
01-1.222-1.2221.137-1.222
02-1.47-1.471.197-1.47
03-1.470.5950.233-0.364
04-1.47-1.471.197-1.47
05-1.47-1.471.197-1.47
06-1.470.728-0.7170.192
070.703-1.470.42-1.47
08-1.47-1.471.046-0.364
09-1.47-0.7171.116-1.47
10-1.47-1.471.197-1.47
110.0550.623-0.616-0.616